Sinus Headache vs. Migraine: The Most Common Misdiagnosis
When researchers have taken people who say they get "sinus headaches" and examined them against formal diagnostic criteria, the large majority turn out to have migraine. In the biggest study of its kind, close to nine in ten met the criteria for migraine or probable migraine. The confusion is understandable: migraine often causes facial pain, nasal congestion and a runny nose, it is frequently triggered by weather changes and seasonal allergies, and it tends to get better on its own within a day or two whether or not anyone treats the sinuses. Genuine sinus headache does exist, but it usually comes with a clear infection or an obvious nasal problem, not with recurring attacks that come and go.
If you have repeated "sinus headaches" that arrive with weather changes, that pattern is worth a second look with a clinician.